GEO GSE289881: single-cell RNA-seq of fibroblast activation protein in human CLAD
Single-cell RNA sequencing of lung tissue from CLAD patients and donors, reported in work on FAP as an early CLAD biomarker.
As of . Primary source: GEO series GSE289881.
Summary
The GEO series record states: single-cell RNA sequencing of human lung tissue from CLAD patients and donors processed with 10x Genomics and analysed with Seurat, to compare gene expression between CLAD and control. Status public on 4 September 2025; contact institute Northwestern University; organism Homo sapiens. The record states that raw files for human samples were not submitted to GEO because of concerns about personally identifiable sequence data.
Details
- accession
- GSE289881
- repository
- GEO
- assay
- Expression profiling by high throughput sequencing (scRNA-seq)
- n
- 10 samples listed in GEO
- organism
- Homo sapiens
- access
- Raw human sequence files were not submitted to GEO (per the series record).
Sources and links
- GEO series GSE289881 (primary)
Related
Linked from (derived)
Known gaps in this record
- licence or reuse terms
- link to the associated paper record (the GEO record lists a PubMed identifier that was not opened)
- data access route beyond the statement in the series record
Information resource only. Not medical advice. Not a substitute for the care of the patient's transplant team.